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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
183
DNase-seq
5
ATAC-seq
3
FAIRE-seq
Assay category
191
DNA accessibility
Date released
173
June, 2019
November, 2018
8
October, 2019
7
August, 2017
2
July, 2019
1
November, 2020
Available data
1609
bam
1562
bigWig
1443
tsv
428
bed narrowPeak
298
fastq
193
bed bed3+
191
bigBed narrowPeak
183
bed broadPeak
181
bigBed broadPeak
77
txt
73
zippedFastqFolder
64
xls
23
bed bedMethyl
23
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
7
bed bedgraph
7
csv
3
hdf5
2
ibed
1
bedpe
1
vcf
Organism
191
Homo sapiens
Biosample type
174
tissue
13
primary cell
3
in vitro differentiated cells
1
cell line
Organ
80
kidney
epithelium
36
limb
33
musculature of body
31
brain
30
heart
29
pancreas
18
ureter
12
connective tissue
12
vasculature
10
blood vessel
4
artery
4
eye
3
adipose tissue
3
liver
3
vein
2
nerve
Project
191
AMP
Genome assembly (visualization)
183
GRCh38
174
hg19
Lab
191
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
assay_title!
ChIP-seq
RNA microarray
month_released!
November, 2018
organ_slims!
epithelium
BIOSAMPLE
ASSAY
191 results
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Clear Filters
DNase-seq
ATAC-seq
FAIRE-seq
tissue
heart
18
muscle of arm
17
kidney
13
1
muscle of leg
13
brain
12
+ See 40 more…
primary cell
cardiac fibroblast
3
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain pericyte
1
+ See 5 more…
in vitro differentiated cells
adipocyte
1
2
cell line
Panc1
1
See all biosamples
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