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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
204
ATAC-seq
175
DNase-seq
4
FAIRE-seq
Assay category
383
DNA accessibility
Date released
162
June, 2019
64
August, 2021
62
February, 2023
38
May, 2022
19
November, 2019
9
November, 2018
8
February, 2021
7
July, 2019
6
October, 2019
5
October, 2017
3
August, 2017
Available data
782
bam
753
bigWig
677
tsv
383
bed narrowPeak
180
bigBed narrowPeak
176
bed broadPeak
175
bed bed3+
174
bigBed broadPeak
157
txt
151
fastq
64
xls
23
bed bedMethyl
23
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
Organism
383
Homo sapiens
Biosample type
383
tissue
69
primary cell
22
in vitro differentiated cells
12
cell line
Organ
133
kidney
66
heart
50
pancreas
44
limb
43
blood vessel
43
vasculature
41
artery
32
musculature of body
30
eye
28
brain
24
liver
18
ureter
12
epithelium
8
bone element
8
skeleton
adipose tissue
6
connective tissue
3
nerve
2
spleen
Project
383
AMP
Genome assembly (visualization)
314
GRCh38
268
hg19
Lab
281
AMP-T2D consortium
64
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
assay_title!
ChIP-seq
STARR-seq
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
383 results
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Clear Filters
ATAC-seq
DNase-seq
FAIRE-seq
tissue
kidney
64
13
1
islet of Langerhans
37
1
1
coronary artery
36
2
liver
20
2
heart
18
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