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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
34
DNase-seq
7
ATAC-seq
6
total RNA-seq
4
Hi-C
WGBS
Assay category
41
DNA accessibility
6
Transcription
4
3D chromatin structure
Date released
32
June, 2019
7
October, 2019
6
February, 2021
4
July, 2019
2
February, 2020
Available data
45
bam
41
bed narrowPeak
39
bigWig
34
bed bed3+
34
bed broadPeak
34
bigBed broadPeak
34
bigBed narrowPeak
6
tsv
Organism
51
Homo sapiens
Biosample type
51
tissue
Organ
677
pancreas
525
connective tissue
412
adipose tissue
348
epithelium
302
kidney
251
heart
234
liver
159
bone element
132
vasculature
blood vessel
107
artery
68
brain
56
eye
56
musculature of body
55
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
vein
3
spleen
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
51
AMP
Genome assembly (visualization)
45
GRCh38
45
hg19
Lab
51
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
ChIP-seq
WGBS
organ_slims!
blood vessel
vein
BIOSAMPLE
ASSAY
51 results
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DNase-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
muscle of arm
17
muscle of leg
13
tibial nerve
2
1
5
gastrocnemius medialis
1
4
distal epiphysis of femur
1
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