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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
30
total RNA-seq
5
WGBS
2
STARR-seq
pCHi-C
1
DNase-seq
1
Hi-C
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
31
Transcription
5
DNA methylation
1
3D chromatin structure
1
DNA accessibility
1
DNA sequencing
Date released
20
May, 2022
12
August, 2021
4
August, 2017
1
December, 2018
1
February, 2020
1
February, 2021
1
July, 2019
1
November, 2018
Available data
10
tsv
3
fastq
1
bam
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
1
csv
1
vcf
Organism
41
Homo sapiens
Biosample type
27
tissue
14
cell line
Organ
232
pancreas
210
kidney
185
epithelium
142
heart
88
bone element
47
blood vessel
47
vasculature
41
liver
39
artery
25
brain
20
eye
19
lung
14
connective tissue
10
musculature of body
9
adipose tissue
8
blood
8
bodily fluid
8
limb
4
skeleton
2
spleen
1
embryo
1
nerve
1
pituitary gland
1
skin of body
1
spinal cord
Project
41
AMP
Genome assembly (visualization)
hg19
171
GRCh38
Lab
20
Karen Mohlke, UNC
12
Bing Ren, UCSD
9
AMP-T2D consortium
assay_title!
ChIP-seq
pCHi-C
assembly!
hg19
BIOSAMPLE
ASSAY
41 results
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Clear Filters
total RNA-seq
WGBS
STARR-seq
DNase-seq
Hi-C
single cell RNA-seq
whole genome sequencing assay
tissue
liver
20
3
1
right lobe of liver
1
1
1
cell line
HepG2
9
1
2
1
1
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