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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
total RNA-seq
20
ATAC-seq
ChIP-seq
2
STARR-seq
1
Hi-C
1
whole genome sequencing assay
Assay category
29
Transcription
20
DNA accessibility
1
3D chromatin structure
1
DNA sequencing
Date released
40
May, 2022
13
August, 2021
Available data
20
bed narrowPeak
20
bigWig
9
tsv
1
bedpe bed3+
1
hic
1
vcf
Organism
53
Homo sapiens
Biosample type
40
tissue
13
cell line
Organ
215
pancreas
158
epithelium
134
kidney
53
liver
19
lung
8
blood
8
bodily fluid
4
connective tissue
Project
53
AMP
Genome assembly (visualization)
21
hg19
Lab
AMP-T2D consortium
40
Karen Mohlke, UNC
13
Bing Ren, UCSD
assay_title!
ChIP-seq
pCHi-C
files.file_type!
txt
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
53 results
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total RNA-seq
ATAC-seq
STARR-seq
Hi-C
whole genome sequencing assay
tissue
liver
20
20
cell line
HepG2
9
2
1
1
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