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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
32
DNase-seq
13
total RNA-seq
3
ATAC-seq
pCHi-C
Assay category
35
DNA accessibility
13
Transcription
Date released
30
June, 2019
July, 2019
12
February, 2020
2
November, 2018
2
October, 2019
1
February, 2023
1
October, 2017
Available data
34
bam
34
bigWig
32
bed bed3+
32
bed broadPeak
32
bed narrowPeak
32
bigBed broadPeak
32
bigBed narrowPeak
13
tsv
3
fastq
1
bed bed3
Organism
48
Homo sapiens
Biosample type
43
tissue
5
primary cell
Organ
721
pancreas
508
connective tissue
404
adipose tissue
376
epithelium
286
kidney
231
heart
221
liver
158
bone element
121
vasculature
119
blood vessel
104
artery
51
eye
51
limb
48
brain
46
musculature of body
19
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
vein
4
spleen
1
pituitary gland
1
skin of body
1
spinal cord
Project
48
AMP
Genome assembly (visualization)
34
GRCh38
24
hg19
Lab
48
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
ChIP-seq
pCHi-C
month_released!
December, 2019
July, 2019
BIOSAMPLE
ASSAY
48 results
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DNase-seq
total RNA-seq
ATAC-seq
tissue
brain
14
1
1
cerebellum (Hemisphere)
1
1
1
frontal cortex
2
1
Ammon's horn
1
1
caudate nucleus
1
1
+ See 16 more…
primary cell
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
See all biosamples
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