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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
104
total RNA-seq
10
ATAC-seq
1
DNase-seq
1
WGBS
Assay category
104
Transcription
11
DNA accessibility
1
DNA methylation
Date released
87
February, 2021
8
August, 2021
5
January, 2019
5
October, 2019
4
March, 2020
4
May, 2021
2
November, 2019
1
November, 2018
Available data
117
bam
108
bigWig
104
tsv
12
bed narrowPeak
6
fastq
bed bed3+
2
bigBed narrowPeak
1
bed bed3
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
hdf5
Organism
116
Homo sapiens
Biosample type
1077
tissue
300
primary cell
145
in vitro differentiated cells
116
cell line
Organ
60
artery
60
blood vessel
60
heart
60
vasculature
36
epithelium
34
pancreas
8
embryo
7
liver
5
kidney
Project
114
AMP
2
T1D
Genome assembly (visualization)
120
hg19
116
GRCh38
Lab
116
AMP-T2D consortium
Audit category:
37
inconsistent ontology term
1
inconsistent replicate
assay_title!
ChIP-seq
small RNA-seq
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
116 results
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total RNA-seq
ATAC-seq
DNase-seq
WGBS
cell line
smooth muscle cell of the coronary artery
52
8
EndoC_BH1
33
1
H1-hESC
8
HepG2
5
1
1
early embryonic cell
2
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