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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
89
total RNA-seq
9
WGBS
6
RRBS
5
ATAC-seq
5
DNase-seq
3
single cell RNA-seq
1
FAIRE-seq
Assay category
92
Transcription
15
DNA methylation
11
DNA accessibility
Date released
680
February, 2021
291
May, 2020
270
August, 2021
234
May, 2021
203
February, 2023
187
June, 2019
178
May, 2022
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
18
November, 2018
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
9
April, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
December, 2018
Available data
109
fastq
104
bam
104
bigWig
92
tsv
10
bed narrowPeak
10
bigBed narrowPeak
6
bed bedMethyl
6
bigBed bedMethyl
2
bed broadPeak
2
bigBed broadPeak
Organism
118
Homo sapiens
Biosample type
108
tissue
9
primary cell
1
in vitro differentiated cells
Organ
95
pancreas
8
connective tissue
7
adipose tissue
6
liver
4
epithelium
4
musculature of body
Project
118
AMP
Genome assembly (visualization)
106
hg19
101
GRCh38
Lab
118
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
ChIP-seq
snATAC-seq
BIOSAMPLE
ASSAY
118 results
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Clear Filters
total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
single cell RNA-seq
FAIRE-seq
tissue
islet of Langerhans
89
1
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
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primary cell
skeletal muscle myoblast
1
2
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic cell
1
+ See 2 more…
in vitro differentiated cells
adipocyte
1
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