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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
DNase-seq
ChIP-seq
3
Hi-C
Assay category
11
DNA accessibility
3
3D chromatin structure
Date released
7
June, 2019
5
October, 2019
2
March, 2020
Available data
83
bam
76
bigWig
68
tsv
58
bed narrowPeak
13
bed bed3+
12
bigBed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
14
Homo sapiens
Biosample type
8
primary cell
6
tissue
Organ
79
kidney
36
limb
35
musculature of body
33
heart
32
brain
22
epithelium
18
ureter
16
pancreas
14
vasculature
12
blood vessel
9
connective tissue
7
liver
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
14
AMP
Genome assembly (visualization)
13
hg19
11
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
assay_title!
ChIP-seq
snDrop-seq
BIOSAMPLE
ASSAY
14 results
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DNase-seq
Hi-C
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
tissue
coronary artery
2
tibial artery
2
aorta
1
ascending aorta
1
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