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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
26
total RNA-seq
18
ATAC-seq
1
Hi-C
1
single cell RNA-seq
Assay category
27
Transcription
18
DNA accessibility
1
3D chromatin structure
Date released
704
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
42
fastq
41
bam
40
bigWig
26
tsv
14
bed narrowPeak
14
bigBed narrowPeak
1
bed broadPeak
1
bedpe
1
csv
1
hic
Organism
46
Homo sapiens
Biosample type
41
primary cell
5
tissue
Organ
45
pancreas
40
epithelium
Project
46
AMP
Genome assembly (visualization)
43
hg19
42
GRCh38
Lab
41
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
assay_title!
ChIP-seq
snDrop-seq
BIOSAMPLE
ASSAY
46 results
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Clear Filters
total RNA-seq
ATAC-seq
Hi-C
single cell RNA-seq
primary cell
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic ductal cell
4
4
pancreatic acinar cell
2
3
pancreatic cell
1
tissue
islet of Langerhans
4
1
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