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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
32
DNase-seq
total RNA-seq
3
ATAC-seq
2
pCHi-C
Assay category
35
DNA accessibility
Date released
30
June, 2019
July, 2019
2
March, 2020
2
November, 2018
1
February, 2023
1
October, 2017
1
October, 2019
Available data
33
bam
33
bigWig
32
bed bed3+
32
bed broadPeak
32
bed narrowPeak
32
bigBed broadPeak
32
bigBed narrowPeak
3
fastq
2
tsv
1
bed bed3
Organism
37
Homo sapiens
Biosample type
32
tissue
5
primary cell
Organ
326
pancreas
256
epithelium
236
kidney
172
heart
97
bone element
66
vasculature
64
blood vessel
52
connective tissue
50
artery
44
limb
44
liver
43
musculature of body
37
brain
36
eye
20
lung
18
ureter
17
adipose tissue
12
skeleton
9
blood
9
bodily fluid
5
spleen
5
vein
3
nerve
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
37
AMP
Genome assembly (visualization)
33
GRCh38
23
hg19
Lab
37
AMP-T2D consortium
assay_title!
ChIP-seq
total RNA-seq
files.file_type!
hdf5
month_released!
July, 2019
BIOSAMPLE
ASSAY
37 results
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Clear Filters
DNase-seq
ATAC-seq
pCHi-C
tissue
brain
14
1
Ammon's horn
1
1
cerebellum (Hemisphere)
1
1
frontal cortex
2
caudate nucleus
1
+ See 10 more…
primary cell
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
See all biosamples
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