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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
18
single cell RNA-seq
6
WGBS
ChIP-seq
3
snDrop-seq
2
pCHi-C
Assay category
27
DNA accessibility
18
Transcription
6
DNA methylation
Date released
200
May, 2022
187
August, 2021
167
February, 2023
140
February, 2021
103
May, 2020
56
September, 2020
48
March, 2020
48
May, 2021
47
September, 2023
41
October, 2019
29
July, 2019
25
February, 2020
17
August, 2017
16
January, 2021
10
November, 2020
8
January, 2018
5
December, 2019
4
July, 2018
4
March, 2023
4
October, 2022
3
March, 2019
3
May, 2023
2
November, 2018
2
November, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
September, 2018
Available data
89
txt
45
fastq
14
tsv
6
csv
bed bedgraph
2
bed bed3+
1
bam
Organism
140
Homo sapiens
Biosample type
93
tissue
46
primary cell
1
cell line
Organ
84
bone element
8
kidney
6
epithelium
6
pancreas
2
liver
1
connective tissue
Project
95
AMP
45
HPAP
Genome assembly (visualization)
565
hg19
GRCh38
Lab
95
AMP-T2D consortium
45
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
32
audit script error
assay_title!
ChIP-seq
assembly!
GRCh38
files.file_type!
bed bedgraph
lab.title!
Xin Sun, UCSD
BIOSAMPLE
ASSAY
140 results
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RNA microarray
snATAC-seq
single cell RNA-seq
WGBS
snDrop-seq
pCHi-C
tissue
bone element
84
kidney
5
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
+ See 1 more…
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
osteoblast
1
cell line
HepG2
1
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