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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
21
ATAC-seq
17
pCHi-C
9
total RNA-seq
1
DNAme array
1
Hi-C
Assay category
21
DNA accessibility
9
Transcription
1
3D chromatin structure
1
DNA methylation
Date released
185
August, 2021
162
May, 2022
144
February, 2021
140
February, 2023
103
May, 2020
56
September, 2020
48
March, 2020
48
May, 2021
47
September, 2023
40
October, 2019
27
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
14
August, 2017
10
November, 2020
8
January, 2018
5
December, 2019
4
July, 2018
4
March, 2023
4
October, 2022
3
March, 2019
3
May, 2023
2
November, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
7
bigWig
2
bed bed3+
1
fastq
Organism
49
Homo sapiens
Biosample type
20
primary cell
17
cell line
10
in vitro differentiated cells
2
tissue
Organ
17
pancreas
16
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
liver
1
thymus
Project
32
AMP
17
T1D
Genome assembly (visualization)
180
hg19
GRCh38
Lab
30
Kyle Gaulton, UCSD
19
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
assay_title!
ChIP-seq
assembly!
GRCh38
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
49 results
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Clear Filters
ATAC-seq
pCHi-C
total RNA-seq
DNAme array
Hi-C
primary cell
CD8-positive, alpha-beta T cell
1
2
monocyte
1
1
1
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
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cell line
EndoC_BH1
16
HepG2
1
in vitro differentiated cells
embryonic stem cell
5
5
tissue
pancreas
1
thymus
1
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