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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
14
single cell RNA-seq
6
WGBS
4
ATAC-seq
ChIP-seq
2
pCHi-C
Assay category
31
DNA accessibility
14
Transcription
6
DNA methylation
Date released
200
May, 2022
170
February, 2023
136
February, 2021
121
August, 2021
103
May, 2020
56
September, 2020
48
May, 2021
46
March, 2020
39
October, 2019
25
February, 2020
24
July, 2019
19
April, 2020
17
August, 2017
16
January, 2021
10
November, 2020
8
January, 2018
4
July, 2018
4
March, 2023
4
October, 2022
3
March, 2019
2
December, 2019
2
November, 2018
2
November, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
September, 2018
Available data
84
txt
46
fastq
6
tsv
4
bed bedgraph
2
bed bed3+
2
csv
1
bam
Organism
137
Homo sapiens
Biosample type
85
tissue
47
primary cell
4
in vitro differentiated cells
1
cell line
Organ
84
bone element
kidney
6
epithelium
6
pancreas
5
connective tissue
2
liver
Project
92
AMP
45
HPAP
Genome assembly (visualization)
609
hg19
GRCh38
Lab
92
AMP-T2D consortium
45
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
27
audit script error
assay_title!
ChIP-seq
assembly!
GRCh38
organ_slims!
kidney
BIOSAMPLE
ASSAY
137 results
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Clear Filters
RNA microarray
snATAC-seq
single cell RNA-seq
WGBS
ATAC-seq
pCHi-C
tissue
bone element
84
liver
1
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
osteoblast
1
pancreatic cell
1
in vitro differentiated cells
adipocyte
4
cell line
HepG2
1
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