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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
5
ATAC-seq
4
DNase-seq
Assay category
9
DNA accessibility
Date released
180
June, 2019
76
August, 2021
38
May, 2022
30
February, 2023
26
November, 2019
14
September, 2018
13
May, 2021
10
August, 2017
10
November, 2018
9
February, 2021
9
October, 2019
6
October, 2017
5
July, 2019
5
September, 2017
2
November, 2020
Available data
25
bam
25
bigWig
16
tsv
9
bed narrowPeak
7
bigBed narrowPeak
4
bed bed3+
3
bed broadPeak
3
bedpe bed3+
3
bigBed broadPeak
3
hic
1
hdf5
Organism
9
Homo sapiens
Biosample type
3
tissue
2
cell line
2
in vitro differentiated cells
2
primary cell
Organ
6
blood vessel
6
limb
vasculature
5
epithelium
3
artery
3
nerve
3
vein
1
kidney
1
liver
1
pancreas
Project
9
AMP
Genome assembly (visualization)
9
GRCh38
9
hg19
Lab
9
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_title!
ChIP-seq
audit.ERROR.category!
inconsistent replicate
organ_slims!
vasculature
BIOSAMPLE
ASSAY
9 results
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ATAC-seq
DNase-seq
tissue
tibial nerve
1
2
cell line
Panc1
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
primary cell
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
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