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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
3
ATAC-seq
2
total RNA-seq
1
DNase-seq
1
pCHi-C
Assay category
4
DNA accessibility
2
Transcription
Date released
4
February, 2023
1
June, 2019
1
March, 2020
1
November, 2019
Available data
3
bed bed3+
2
bam
2
bed narrowPeak
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
bigBed narrowPeak
1
bigWig
1
tsv
Organism
7
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
primary cell
1
stem cell
1
tissue
Organ
84
bone element
66
pancreas
65
epithelium
7
connective tissue
6
kidney
2
embryo
1
adipose tissue
1
brain
1
heart
1
limb
1
liver
1
musculature of body
1
stomach
1
urinary bladder
1
vasculature
Project
7
AMP
Genome assembly (visualization)
4
hg19
2
GRCh38
Lab
7
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
assay_title!
ChIP-seq
files.file_type!
bed bedMethyl
organ_slims!
gonad
BIOSAMPLE
ASSAY
7 results
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ATAC-seq
total RNA-seq
DNase-seq
pCHi-C
in vitro differentiated cells
immature adipocyte
2
2
primary cell
cardiac fibroblast
1
stem cell
mesenchymal stem cell
1
tissue
adipose tissue(adipose white tissue)
1
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