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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
2
DNA accessibility
2
DNA methylation
Date released
3
November, 2018
1
March, 2020
1
October, 2017
Available data
4
bam
4
bigWig
4
fastq
2
bed bedMethyl
2
bed narrowPeak
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
tsv
Organism
5
Homo sapiens
Biosample type
5
tissue
Organ
671
pancreas
512
connective tissue
406
adipose tissue
382
epithelium
291
kidney
234
heart
229
liver
158
bone element
122
vasculature
120
blood vessel
104
artery
55
eye
51
limb
50
brain
47
musculature of body
20
lung
18
ureter
16
skeleton
15
embryo
8
nerve
5
spleen
5
vein
2
intestine
1
adrenal gland
1
blood
1
bodily fluid
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
5
AMP
Genome assembly (visualization)
4
GRCh38
2
hg19
Lab
5
AMP-T2D consortium
assay_title!
ChIP-seq
audit.NOT_COMPLIANT.category!
missing controlled_by
lab.title!
Kyle Gaulton, UCSD
month_released!
July, 2019
BIOSAMPLE
ASSAY
5 results
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Clear Filters
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
2
1
1
1
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