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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
89
total RNA-seq
10
ATAC-seq
9
WGBS
6
RRBS
5
DNase-seq
1
FAIRE-seq
Assay category
89
Transcription
16
DNA accessibility
15
DNA methylation
Date released
602
February, 2021
270
August, 2021
246
May, 2020
182
June, 2019
168
July, 2018
166
May, 2021
115
August, 2017
97
July, 2019
71
February, 2023
66
May, 2022
65
October, 2019
53
March, 2020
49
April, 2018
48
November, 2019
41
September, 2018
22
February, 2020
18
November, 2018
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
5
January, 2019
5
March, 2019
5
September, 2017
4
August, 2018
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
1
October, 2022
Available data
111
fastq
106
bam
106
bigWig
89
tsv
15
bed narrowPeak
15
bigBed narrowPeak
6
bed bedMethyl
6
bigBed bedMethyl
2
bed broadPeak
2
bigBed broadPeak
Organism
120
Homo sapiens
Biosample type
108
tissue
11
primary cell
1
in vitro differentiated cells
Organ
99
pancreas
8
connective tissue
8
epithelium
7
adipose tissue
6
liver
4
musculature of body
Project
120
AMP
Genome assembly (visualization)
108
hg19
103
GRCh38
Lab
120
AMP-T2D consortium
assay_title!
ChIP-seq
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
120 results
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Clear Filters
total RNA-seq
ATAC-seq
WGBS
RRBS
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
89
1
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
+ See 2 more…
primary cell
pancreatic alpha cell
3
pancreatic beta cell
3
skeletal muscle myoblast
1
2
pancreatic acinar cell
2
in vitro differentiated cells
adipocyte
1
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