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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • ChIP-seq
  • 14total RNA-seq
  • 2Hi-C
  • 2STARR-seq
  • 2pCHi-C
  • 1ATAC-seq
  • 1WGBS
  • 1whole genome sequencing assay
Assay category
  • 14Transcription
  • 23D chromatin structure
  • 1DNA accessibility
  • 1DNA methylation
  • 1DNA sequencing
Date released
  • 13August, 2021
  • 5January, 2019
  • 2February, 2021
  • 1December, 2018
  • 1May, 2020
  • 1November, 2018
Available data
  • 15tsv
  • 7bam
  • 7fastq
  • 6bigWig
  • 1bed bed3
  • 1bed bed3+
  • 1bed bedMethyl
  • 1bed narrowPeak
  • 1bedpe bed3+
  • 1bigBed bedMethyl
  • 1hic
  • 1vcf
Organism
  • 23Homo sapiens
Biosample type
  • 23cell line
Organ
  • 23liver
Project
  • 23AMP
Genome assembly (visualization)
  • 8hg19
  • 7GRCh38
Lab
  • 13Bing Ren, UCSD
  • 10AMP-T2D consortium
Audit category:
  • 1inconsistent replicate
assay_title!
  • ChIP-seq
BIOSAMPLE
ASSAY

23 results

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Clear Filters
total RNA-seq
Hi-C
STARR-seq
pCHi-C
ATAC-seq
WGBS
whole genome sequencing assay
cell line
HepG214222111
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