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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
ATAC-seq
41
WGBS
34
single cell RNA-seq
26
total RNA-seq
22
snATAC-seq
Assay category
106
DNA accessibility
60
Transcription
41
DNA methylation
Date released
613
February, 2021
290
May, 2020
250
August, 2021
214
May, 2021
200
May, 2022
199
February, 2023
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
65
October, 2019
59
September, 2020
51
March, 2020
49
April, 2018
47
September, 2023
45
November, 2019
40
September, 2018
25
February, 2020
19
April, 2020
16
January, 2021
16
November, 2018
15
February, 2018
15
May, 2023
10
December, 2019
10
November, 2020
8
October, 2017
7
August, 2020
7
January, 2018
5
March, 2019
5
September, 2017
4
August, 2018
3
June, 2018
3
March, 2023
3
October, 2022
2
October, 2018
1
August, 2022
Available data
134
zippedFastqFolder
38
bed narrowPeak
31
fastq
27
bigWig
24
bam
7
txt
1
bed bed3+
Organism
207
Homo sapiens
Biosample type
141
primary cell
66
tissue
Organ
111
pancreas
87
epithelium
40
liver
2
musculature of body
Project
141
HPAP
66
AMP
Genome assembly (visualization)
39
hg19
7
GRCh38
Lab
141
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
ChIP-seq
biosample_type!
cell line
files.file_type!
csv
BIOSAMPLE
ASSAY
207 results
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Clear Filters
ATAC-seq
WGBS
single cell RNA-seq
total RNA-seq
snATAC-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
27
25
pancreatic beta cell
15
16
pancreatic acinar cell
4
tissue
liver
20
20
islet of Langerhans
18
6
skeletal muscle tissue
1
1
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