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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
93
single cell RNA-seq
62
total RNA-seq
43
ATAC-seq
27
DNase-seq
3
Hi-C
3
pCHi-C
Assay category
155
Transcription
70
DNA accessibility
3
3D chromatin structure
Date released
92
August, 2021
60
February, 2021
36
February, 2023
27
June, 2019
July, 2019
7
March, 2020
3
February, 2020
3
May, 2021
3
October, 2019
Available data
157
tsv
94
bam
86
bigWig
70
bed narrowPeak
27
bed bed3+
27
bed broadPeak
27
bigBed broadPeak
27
bigBed narrowPeak
3
bedpe bed3+
3
hic
Organism
231
Homo sapiens
Biosample type
170
tissue
60
cell line
primary cell
1
in vitro differentiated cells
Organ
494
connective tissue
446
pancreas
406
adipose tissue
277
kidney
231
heart
221
liver
158
bone element
113
blood vessel
113
vasculature
104
artery
81
epithelium
54
eye
51
limb
46
musculature of body
45
brain
20
lung
18
ureter
16
skeleton
15
embryo
8
nerve
5
spleen
2
intestine
2
thymus
1
adrenal gland
1
blood
1
bodily fluid
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
231
AMP
Genome assembly (visualization)
129
GRCh38
95
hg19
Lab
231
AMP-T2D consortium
assay_title!
ChIP-seq
biosample_type!
primary cell
month_released!
July, 2019
BIOSAMPLE
ASSAY
231 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
DNase-seq
Hi-C
pCHi-C
tissue
coronary artery
1
35
2
heart left ventricle
18
1
3
1
1
heart
1
2
18
1
heart right ventricle
17
1
1
1
1
left cardiac atrium
18
1
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cell line
smooth muscle cell of the coronary artery
52
8
in vitro differentiated cells
cardiac fibroblast
1
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