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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
33
single cell RNA-seq
21
snATAC-seq
ChIP-seq
5
total RNA-seq
Assay category
60
DNA accessibility
41
DNA methylation
38
Transcription
Date released
194
May, 2021
162
February, 2021
148
May, 2020
134
May, 2022
110
February, 2023
59
September, 2020
48
July, 2018
47
August, 2021
43
April, 2018
41
September, 2018
31
July, 2019
25
October, 2019
24
June, 2019
March, 2020
15
February, 2018
12
November, 2020
8
January, 2021
8
November, 2019
7
August, 2017
7
August, 2020
7
December, 2019
6
January, 2018
5
January, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
November, 2018
2
October, 2018
1
December, 2018
Available data
134
zippedFastqFolder
5
bam
5
bigWig
5
fastq
5
tsv
Organism
139
Homo sapiens
Biosample type
134
primary cell
tissue
5
cell line
Organ
80
epithelium
80
pancreas
5
liver
Project
134
HPAP
5
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
134
Klaus Kaestner, Upenn
5
AMP-T2D consortium
assay_title!
ChIP-seq
biosample_type!
tissue
month_released!
March, 2020
BIOSAMPLE
ASSAY
139 results
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Clear Filters
WGBS
ATAC-seq
single cell RNA-seq
snATAC-seq
total RNA-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
cell line
HepG2
5
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