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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
59
total RNA-seq
29
ATAC-seq
16
pCHi-C
1
DNAme array
Assay category
59
Transcription
29
DNA accessibility
1
DNA methylation
Date released
148
May, 2020
136
February, 2021
134
May, 2022
105
May, 2021
February, 2023
59
September, 2020
48
July, 2018
43
April, 2018
41
September, 2018
31
July, 2019
26
August, 2021
24
June, 2019
17
October, 2019
12
November, 2020
11
March, 2020
8
January, 2021
7
August, 2020
6
August, 2017
5
December, 2019
5
January, 2019
5
September, 2017
4
October, 2022
3
August, 2018
3
June, 2018
3
March, 2023
3
November, 2019
2
November, 2018
2
October, 2018
1
December, 2018
1
January, 2018
Available data
69
bam
58
bigWig
56
tsv
13
bed narrowPeak
2
bed bed3+
Organism
105
Homo sapiens
Biosample type
89
in vitro differentiated cells
85
primary cell
40
tissue
20
cell line
Organ
20
epithelium
20
pancreas
1
bone element
1
bone marrow
1
connective tissue
Project
67
T1D
38
AMP
Genome assembly (visualization)
71
hg19
69
GRCh38
Lab
69
Kyle Gaulton, UCSD
36
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
assay_title!
ChIP-seq
month_released!
February, 2023
BIOSAMPLE
ASSAY
105 results
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Clear Filters
total RNA-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte
52
13
1
1
CD8-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
+ See 11 more…
cell line
EndoC_BH1
4
16
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