Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
895
total RNA-seq
ChIP-seq
40
ATAC-seq
16
WGBS
16
small RNA-seq
6
single cell RNA-seq
Assay category
917
Transcription
40
DNA accessibility
16
DNA methylation
Date released
444
February, 2021
143
May, 2020
116
July, 2018
91
August, 2017
61
July, 2019
38
May, 2021
20
May, 2022
19
November, 2019
10
October, 2019
9
March, 2020
8
October, 2017
6
April, 2018
6
November, 2018
2
January, 2018
Available data
1185
bam
1157
bigWig
1076
tsv
389
bed narrowPeak
bigBed narrowPeak
178
bed broadPeak
177
bed bed3+
176
bigBed broadPeak
157
fastq
157
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
Organism
973
Homo sapiens
Biosample type
973
tissue
314
primary cell
141
in vitro differentiated cells
cell line
1
stem cell
Organ
458
connective tissue
400
adipose tissue
282
pancreas
172
liver
58
bone element
23
heart
11
brain
8
blood vessel
8
vasculature
7
limb
6
musculature of body
5
nerve
3
spleen
2
artery
2
kidney
Project
973
AMP
Genome assembly (visualization)
955
hg19
949
GRCh38
Lab
952
AMP-T2D consortium
20
Karen Mohlke, UNC
1
Stephen Parker, UMich
assay_title!
ChIP-seq
biosample_type!
cell line
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
973 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
WGBS
small RNA-seq
single cell RNA-seq
tissue
adipose tissue
381
1
2
islet of Langerhans
260
3
6
liver
147
20
1
bone tissue
58
body of pancreas
2
4
2
2
+ See 32 more…
See all biosamples
Download