Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
455
total RNA-seq
ChIP-seq
6
ATAC-seq
6
WGBS
2
DNase-seq
2
pCHi-C
2
small RNA-seq
1
RNA microarray
Assay category
457
Transcription
8
DNA accessibility
6
DNA methylation
Date released
444
February, 2021
10
July, 2019
7
August, 2017
2
February, 2020
2
March, 2020
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
462
bigWig
461
bam
458
tsv
6
bed narrowPeak
6
fastq
4
bigBed narrowPeak
2
bed bed3+
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
2
bigBed broadPeak
Organism
473
Homo sapiens
Biosample type
474
tissue
30
in vitro differentiated cells
27
primary cell
1
stem cell
Organ
473
connective tissue
415
adipose tissue
388
pancreas
272
kidney
206
liver
190
heart
158
bone element
60
blood vessel
60
vasculature
56
brain
56
limb
54
eye
53
musculature of body
45
artery
20
lung
18
ureter
16
skeleton
15
epithelium
8
nerve
5
spleen
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
474
AMP
Genome assembly (visualization)
463
hg19
462
GRCh38
Lab
474
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
474 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
WGBS
DNase-seq
pCHi-C
small RNA-seq
RNA microarray
tissue
adipose tissue
382
3
3
1
bone tissue
58
subcutaneous adipose tissue
7
1
1
1
omental fat pad
5
1
2
1
subcutaneous abdominal adipose tissue
3
+ See 3 more…
See all biosamples
Download