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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
38
ATAC-seq
9
DNase-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
Assay category
48
DNA accessibility
5
3D chromatin structure
2
DNA methylation
Date released
35
February, 2023
February, 2021
7
October, 2019
6
July, 2019
5
June, 2019
2
March, 2020
Available data
48
bed narrowPeak
22
bigWig
21
bam
tsv
11
bed bed3+
10
bigBed narrowPeak
9
bed broadPeak
9
bigBed broadPeak
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
55
Homo sapiens
Biosample type
46
tissue
9
primary cell
Organ
311
pancreas
278
kidney
239
epithelium
83
heart
62
liver
58
vasculature
55
blood vessel
51
eye
48
musculature of body
47
connective tissue
43
limb
42
brain
41
artery
19
lung
18
ureter
17
adipose tissue
9
blood
9
bodily fluid
9
bone element
skeleton
5
vein
4
spleen
3
nerve
1
bone marrow
1
embryo
1
pericardium
1
pituitary gland
1
skin of body
1
thymus
Project
55
AMP
Genome assembly (visualization)
48
GRCh38
17
hg19
Lab
55
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
ChIP-seq
files.file_type!
tsv
month_released!
February, 2021
organ_slims!
skeleton
BIOSAMPLE
ASSAY
55 results
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Clear Filters
ATAC-seq
DNase-seq
Hi-C
WGBS
FAIRE-seq
tissue
coronary artery
36
2
aorta
1
2
tibial artery
1
2
ascending aorta
1
thoracic aorta
1
primary cell
endothelial cell of umbilical vein
2
2
1
brain microvascular endothelial cell
1
1
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
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