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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
DNase-seq
ChIP-seq
Assay category
195
DNA accessibility
Date released
182
June, 2019
9
November, 2018
2
August, 2017
1
November, 2020
1
October, 2019
Available data
1726
bam
1698
bigWig
1527
tsv
501
fastq
433
bed narrowPeak
229
bigBed narrowPeak
207
bed bed3+
197
bed broadPeak
195
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
3
cool
3
hdf5
2
ibed
1
bedpe
1
vcf
Organism
195
Homo sapiens
Biosample type
169
tissue
24
primary cell
1
cell line
1
in vitro differentiated cells
Organ
78
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
16
epithelium
11
vasculature
blood vessel
9
connective tissue
7
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
nerve
2
vein
1
spleen
Project
195
AMP
Genome assembly (visualization)
194
GRCh38
173
hg19
Lab
195
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_title!
ChIP-seq
lab.title!
Anna Gloyn, Oxford
organ_slims!
blood vessel
nerve
BIOSAMPLE
ASSAY
195 results
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Clear Filters
DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 35 more…
primary cell
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 15 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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