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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
198
DNase-seq
23
ATAC-seq
4
FAIRE-seq
Assay category
225
DNA accessibility
Date released
181
June, 2019
14
September, 2018
9
November, 2018
8
August, 2017
6
October, 2019
5
September, 2017
2
July, 2019
Available data
1320
bam
1281
bigWig
1122
tsv
490
fastq
472
bed narrowPeak
225
bigBed narrowPeak
202
bed bed3+
197
bed broadPeak
195
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
21
bedpe bed3+
21
hic
8
csv
6
bed bed3
4
hdf5
3
bed bedgraph
3
cool
2
ibed
1
bedpe
vcf
Organism
225
Homo sapiens
Biosample type
180
tissue
43
primary cell
2
cell line
Organ
80
kidney
40
epithelium
36
limb
33
brain
33
musculature of body
32
pancreas
30
heart
18
ureter
connective tissue
12
vasculature
10
blood vessel
6
liver
4
adipose tissue
4
artery
4
eye
vein
2
nerve
1
spleen
Project
225
AMP
Genome assembly (visualization)
219
GRCh38
203
hg19
Lab
225
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
assay_title!
ChIP-seq
files.file_type!
vcf
organ_slims!
connective tissue
vein
BIOSAMPLE
ASSAY
225 results
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Clear Filters
DNase-seq
ATAC-seq
FAIRE-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
1
muscle of leg
13
+ See 39 more…
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
glomerular visceral epithelial cell
2
+ See 17 more…
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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