Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
209
DNase-seq
27
ATAC-seq
5
FAIRE-seq
Assay category
241
DNA accessibility
Date released
187
June, 2019
14
September, 2018
12
October, 2019
10
August, 2017
10
November, 2018
5
September, 2017
2
July, 2019
1
November, 2020
Available data
1814
bam
1779
bigWig
1600
tsv
501
fastq
492
bed narrowPeak
241
bigBed narrowPeak
220
bed bed3+
208
bed broadPeak
206
bigBed broadPeak
161
txt
zippedFastqFolder
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
bedpe
1
tar
1
vcf
Organism
241
Homo sapiens
Biosample type
184
tissue
52
primary cell
3
in vitro differentiated cells
2
cell line
Organ
80
kidney
40
epithelium
36
limb
33
brain
33
musculature of body
32
pancreas
30
heart
18
ureter
13
connective tissue
12
vasculature
10
blood vessel
6
liver
4
adipose tissue
4
artery
4
eye
3
vein
2
nerve
1
spleen
Project
241
AMP
Genome assembly (visualization)
231
GRCh38
218
hg19
Lab
241
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_title!
ChIP-seq
files.file_type!
xls
zippedFastqFolder
BIOSAMPLE
ASSAY
241 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ATAC-seq
FAIRE-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
1
muscle of leg
13
+ See 42 more…
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cardiac fibroblast
3
+ See 22 more…
in vitro differentiated cells
adipocyte
1
2
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
Download