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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
192
DNase-seq
5
ATAC-seq
4
FAIRE-seq
Assay category
201
DNA accessibility
Date released
173
June, 2019
10
November, 2018
8
October, 2019
7
August, 2017
2
July, 2019
1
November, 2020
Available data
1626
bam
1579
bigWig
1444
tsv
438
bed narrowPeak
315
fastq
202
bed bed3+
201
bigBed narrowPeak
192
bed broadPeak
190
bigBed broadPeak
161
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
8
csv
7
bed bedgraph
3
hdf5
2
ibed
1
bedpe
1
vcf
Organism
201
Homo sapiens
Biosample type
184
tissue
13
primary cell
3
in vitro differentiated cells
1
cell line
Organ
80
kidney
epithelium
36
limb
33
brain
33
musculature of body
32
pancreas
30
heart
18
ureter
13
connective tissue
12
vasculature
10
blood vessel
6
liver
4
adipose tissue
4
artery
4
eye
3
vein
2
nerve
1
spleen
Project
201
AMP
Genome assembly (visualization)
192
GRCh38
184
hg19
Lab
201
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
assay_title!
ChIP-seq
month_released!
December, 2018
November, 2017
organ_slims!
epithelium
BIOSAMPLE
ASSAY
201 results
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Clear Filters
DNase-seq
ATAC-seq
FAIRE-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
1
muscle of leg
13
+ See 42 more…
primary cell
cardiac fibroblast
3
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain pericyte
1
+ See 5 more…
in vitro differentiated cells
adipocyte
1
2
cell line
Panc1
1
See all biosamples
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