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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
single cell RNA-seq
ChIP-seq
7
ATAC-seq
2
total RNA-seq
Assay category
50
Transcription
7
DNA accessibility
Date released
102
August, 2017
76
February, 2023
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2018
41
September, 2020
24
May, 2022
17
November, 2018
15
February, 2018
7
August, 2020
7
October, 2017
5
January, 2018
5
January, 2019
5
September, 2017
3
August, 2018
3
June, 2018
2
October, 2018
1
December, 2018
1
March, 2019
Available data
171
bigWig
170
bam
164
tsv
57
fastq
5
bed narrowPeak
1
bed broadPeak
Organism
57
Homo sapiens
Biosample type
48
primary cell
9
tissue
Organ
44
pancreas
33
epithelium
3
connective tissue
adipose tissue
1
brain
1
spleen
Project
57
AMP
Genome assembly (visualization)
57
GRCh38
56
hg19
Lab
56
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
6
inconsistent ontology term
assay_title!
ChIP-seq
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
57 results
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single cell RNA-seq
ATAC-seq
total RNA-seq
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
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tissue
body of pancreas
4
islet of Langerhans
1
2
cerebellum (Hemisphere)
1
spleen
1
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