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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
136
total RNA-seq
27
single cell RNA-seq
18
ATAC-seq
4
DNase-seq
1
Hi-C
Assay category
163
Transcription
22
DNA accessibility
1
3D chromatin structure
Date released
91
August, 2017
40
September, 2018
25
July, 2018
14
February, 2018
5
January, 2019
4
October, 2017
2
November, 2018
2
October, 2018
1
August, 2018
1
December, 2018
1
June, 2018
Available data
186
fastq
185
bigWig
184
bam
163
tsv
21
bed narrowPeak
18
bigBed narrowPeak
5
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
Organism
186
Homo sapiens
Biosample type
95
tissue
70
primary cell
15
in vitro differentiated cells
6
cell line
Organ
154
pancreas
57
epithelium
7
liver
4
embryo
3
connective tissue
1
brain
Project
186
AMP
Genome assembly (visualization)
185
hg19
184
GRCh38
Lab
185
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
7
inconsistent ontology term
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
186 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
DNase-seq
Hi-C
tissue
islet of Langerhans
89
1
body of pancreas
3
brain
1
liver
1
primary cell
pancreatic beta cell
10
2
4
pancreatic alpha cell
10
1
3
pancreatic acinar cell
4
4
3
pancreatic ductal cell
4
2
4
co-expressing pancreatic endocrine cell
2
+ See 9 more…
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
posterior foregut
2
primitive gut cell
2
+ See 3 more…
cell line
HepG2
5
1
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