Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • ChIP-seq
  • 37total RNA-seq
  • 28single cell RNA-seq
  • 26ATAC-seq
  • 11WGBS
Assay category
  • 65Transcription
  • 26DNA accessibility
  • 11DNA methylation
Date released
  • 24May, 2022
  • 18September, 2020
  • 17April, 2018
  • 15February, 2018
  • 8July, 2018
  • 6August, 2017
  • 6February, 2021
  • 6October, 2017
  • 1June, 2018
  • 1November, 2018
Available data
  • 100fastq
  • 76bam
  • 52bigWig
  • 47tsv
  • 26bed narrowPeak
  • 6txt
  • 3bed bedMethyl
  • 3bigBed bedMethyl
  • 2bigBed narrowPeak
  • 2zippedFastqFolder
Organism
  • 102Homo sapiens
Biosample type
  • 50primary cell
  • 37tissue
  • 15in vitro differentiated cells
Organ
  • 69pancreas
  • 40epithelium
  • 5adipose tissue
  • 5connective tissue
  • 4embryo
  • 2liver
  • 1spleen
Project
  • 78AMP
  • 24HPAP
Genome assembly (visualization)
  • 67hg19
  • 52GRCh38
Lab
  • 54AMP-T2D consortium
  • 24Klaus Kaestner, Upenn
  • 24Kyle Gaulton, UCSD
assay_title!
  • ChIP-seq
BIOSAMPLE
ASSAY

102 results

search-icontable-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
primary cell
pancreatic alpha cell1546
pancreatic beta cell14
mesenchymal cell4
pancreatic cell4
pancreatic delta cell3
tissue
islet of Langerhans618
body of pancreas4
adipose tissue3
liver1
omental fat pad1
in vitro differentiated cells
pancreatic endoderm4
definitive endodermal cell2
embryonic stem cell2
endocrine cell2
posterior foregut2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego