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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
DNase-seq
ChIP-seq
2
Hi-C
1
FAIRE-seq
Assay category
21
DNA accessibility
2
3D chromatin structure
Date released
18
June, 2019
4
October, 2019
1
March, 2020
Available data
21
bam
21
bed narrowPeak
21
bigBed narrowPeak
21
bigWig
20
bed bed3+
20
bed broadPeak
20
bigBed broadPeak
2
hic
1
bedpe bed3+
1
tar
Organism
23
Homo sapiens
Biosample type
18
tissue
5
primary cell
Organ
728
pancreas
531
connective tissue
418
adipose tissue
395
epithelium
259
heart
239
liver
160
kidney
159
bone element
134
vasculature
131
blood vessel
107
artery
68
brain
57
musculature of body
56
eye
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
23
AMP
Genome assembly (visualization)
23
hg19
20
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
ChIP-seq
lab.title!
Katalin Susztak, Upenn
organ_slims!
limb
BIOSAMPLE
ASSAY
23 results
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Clear Filters
DNase-seq
Hi-C
FAIRE-seq
tissue
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
primary cell
endothelial cell of umbilical vein
2
2
1
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