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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
5
total RNA-seq
4
DNase-seq
ChIP-seq
1
RRBS
Assay category
31
DNA accessibility
5
Transcription
1
DNA methylation
Date released
31
February, 2023
October, 2019
4
June, 2019
1
February, 2020
1
July, 2019
Available data
31
bed narrowPeak
5
tsv
4
bam
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
4
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
37
Homo sapiens
Biosample type
35
tissue
2
primary cell
Organ
722
pancreas
528
connective tissue
417
adipose tissue
383
epithelium
293
kidney
256
heart
237
liver
159
bone element
127
vasculature
124
blood vessel
104
artery
66
brain
57
musculature of body
46
limb
37
eye
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
5
spleen
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
37
AMP
Genome assembly (visualization)
32
hg19
4
GRCh38
Lab
37
AMP-T2D consortium
assay_title!
ChIP-seq
month_released!
June, 2018
October, 2019
organ_slims!
mammary gland
BIOSAMPLE
ASSAY
37 results
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ATAC-seq
total RNA-seq
DNase-seq
RRBS
tissue
retina
15
3
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
1
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