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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
8
ATAC-seq
7
total RNA-seq
4
DNase-seq
4
Hi-C
1
WGBS
Assay category
12
DNA accessibility
7
Transcription
4
3D chromatin structure
1
DNA methylation
Date released
June, 2019
10
October, 2019
6
February, 2021
5
July, 2019
3
February, 2020
Available data
17
bam
12
bed narrowPeak
11
bigWig
7
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
24
Homo sapiens
Biosample type
24
tissue
Organ
724
pancreas
525
connective tissue
417
adipose tissue
381
epithelium
237
liver
229
heart
224
kidney
159
bone element
127
vasculature
126
blood vessel
105
artery
52
eye
38
brain
24
limb
24
musculature of body
20
lung
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
24
AMP
Genome assembly (visualization)
17
GRCh38
16
hg19
Lab
24
AMP-T2D consortium
assay_title!
ChIP-seq
month_released!
June, 2019
organ_slims!
skin of body
BIOSAMPLE
ASSAY
24 results
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ATAC-seq
total RNA-seq
DNase-seq
Hi-C
WGBS
tissue
tibial nerve
1
5
2
gastrocnemius medialis
1
4
tibial artery
1
1
2
distal epiphysis of femur
1
distal epiphysis of humerus
1
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