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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
192
DNase-seq
89
total RNA-seq
9
WGBS
6
RRBS
5
ATAC-seq
1
FAIRE-seq
Assay category
198
DNA accessibility
89
Transcription
15
DNA methylation
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
288
bam
288
bigWig
197
bed narrowPeak
197
bigBed narrowPeak
189
bed broadPeak
189
bigBed broadPeak
187
bed bed3+
106
fastq
89
tsv
6
bed bedMethyl
6
bigBed bedMethyl
Organism
302
Homo sapiens
Biosample type
271
tissue
30
primary cell
1
in vitro differentiated cells
Organ
98
pancreas
78
kidney
37
musculature of body
32
limb
30
brain
30
heart
18
ureter
17
epithelium
14
connective tissue
8
adipose tissue
8
liver
7
vasculature
5
blood vessel
4
eye
2
artery
Project
302
AMP
Genome assembly (visualization)
285
GRCh38
267
hg19
Lab
302
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_title!
ChIP-seq
month_released!
January, 2018
BIOSAMPLE
ASSAY
302 results
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Clear Filters
DNase-seq
total RNA-seq
WGBS
RRBS
ATAC-seq
FAIRE-seq
tissue
islet of Langerhans
1
89
1
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
+ See 41 more…
primary cell
cardiac fibroblast
3
skeletal muscle myoblast
2
1
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 19 more…
in vitro differentiated cells
adipocyte
1
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