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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
16
snATAC-seq
9
DNase-seq
7
WGBS
4
single cell RNA-seq
1
FAIRE-seq
Assay category
26
DNA accessibility
7
DNA methylation
4
Transcription
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
21
fastq
20
bam
20
bigWig
10
bed narrowPeak
10
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
3
tsv
1
csv
Organism
37
Homo sapiens
Biosample type
24
tissue
12
primary cell
1
cell line
Organ
16
pancreas
8
blood
8
bodily fluid
4
liver
3
spleen
2
brain
1
adipose tissue
1
connective tissue
1
epithelium
Project
21
AMP
16
T1D
Genome assembly (visualization)
19
GRCh38
13
hg19
Lab
21
AMP-T2D consortium
16
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
37 results
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Clear Filters
snATAC-seq
DNase-seq
WGBS
single cell RNA-seq
FAIRE-seq
tissue
pancreas
4
2
1
body of pancreas
2
2
islet of Langerhans
4
spleen
1
2
brain
2
+ See 3 more…
primary cell
peripheral blood mononuclear cell
8
pancreatic cell
2
pancreatic ductal cell
1
unclassified exocrine cell
1
cell line
HepG2
1
See all biosamples
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