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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
ChIP-seq
3
single cell RNA-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
187
DNA accessibility
7
Transcription
1
3D chromatin structure
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
October, 2018
1
August, 2022
1
December, 2018
Available data
190
bam
190
bigWig
187
bed bed3+
187
bed broadPeak
187
bed narrowPeak
187
bigBed broadPeak
187
bigBed narrowPeak
3
fastq
3
tsv
1
hic
Organism
191
Homo sapiens
Biosample type
163
tissue
28
primary cell
2
cell line
2
stem cell
Organ
78
kidney
33
musculature of body
32
limb
30
brain
30
heart
18
ureter
15
epithelium
7
vasculature
6
connective tissue
5
blood vessel
5
pancreas
4
eye
2
artery
2
liver
1
adipose tissue
Project
190
AMP
4
community
1
ITG
Genome assembly (visualization)
191
GRCh38
167
hg19
Lab
190
AMP-T2D consortium
4
Anna Gloyn, Oxford
1
ITG
Audit category:
5
inconsistent ontology term
assay_title!
ChIP-seq
month_released!
October, 2018
BIOSAMPLE
ASSAY
195 results
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Clear Filters
DNase-seq
single cell RNA-seq
CRISPR RNA-seq
CRISPRi RNA-seq
Hi-C
shRNA RNA-seq
siRNA RNA-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 19 more…
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
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