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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • ChIP-seq
  • 93single cell RNA-seq
  • 72total RNA-seq
  • 47ATAC-seq
  • 30DNase-seq
  • 8WGBS
  • 3Hi-C
  • 3pCHi-C
  • 2RRBS
  • 1small RNA-seq
Assay category
  • 166Transcription
  • 77DNA accessibility
  • 10DNA methylation
  • 33D chromatin structure
Date released
  • 92August, 2021
  • 60February, 2021
  • 36February, 2023
  • 30June, 2019
  • 25July, 2019
  • 7March, 2020
  • 3February, 2020
  • 3May, 2021
  • 3October, 2019
Available data
  • 168tsv
  • 118bam
  • 110bigWig
  • 77bed narrowPeak
  • 30bed bed3+
  • 30bed broadPeak
  • 30bigBed broadPeak
  • 30bigBed narrowPeak
  • 8bed bedMethyl
  • 8bigBed bedMethyl
  • 3bedpe bed3+
  • 3hic
Organism
  • 259Homo sapiens
Biosample type
  • 190tissue
  • 60cell line
  • 8primary cell
  • 1in vitro differentiated cells
Organ
  • 728pancreas
  • 531connective tissue
  • 418adipose tissue
  • 395epithelium
  • 302kidney
  • 259heart
  • 239liver
  • 159bone element
  • 134vasculature
  • 131blood vessel
  • 107artery
  • 68brain
  • 57musculature of body
  • 56eye
  • 56limb
  • 20lung
  • 18ureter
  • 16skeleton
  • 15embryo
  • 9blood
  • 9bodily fluid
  • 8nerve
  • 5spleen
  • 5vein
  • 2intestine
  • 2pericardium
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1mammary gland
  • 1ovary
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 259AMP
Genome assembly (visualization)
  • 153GRCh38
  • 114hg19
Lab
  • 259AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
assay_title!
  • ChIP-seq
BIOSAMPLE
ASSAY

259 results

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Clear Filters
single cell RNA-seq
total RNA-seq
ATAC-seq
DNase-seq
WGBS
Hi-C
pCHi-C
RRBS
small RNA-seq
tissue
coronary artery1362
heart left ventricle183234111
heart1418111
heart right ventricle1711211
right cardiac atrium1811
cell line
smooth muscle cell of the coronary artery528
primary cell
cardiac fibroblast31
cardiac atrium fibroblast1
cardiac ventricle fibroblast1
endothelial cell of coronary artery1
smooth muscle cell of the coronary artery1
in vitro differentiated cells
cardiac fibroblast1
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