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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • ChIP-seq
  • 36DNase-seq
  • 8ATAC-seq
  • 7total RNA-seq
  • 4Hi-C
  • 1WGBS
Assay category
  • 44DNA accessibility
  • 7Transcription
  • 43D chromatin structure
  • 1DNA methylation
Date released
  • 32June, 2019
  • 10October, 2019
  • 6February, 2021
  • 5July, 2019
  • 3February, 2020
Available data
  • 49bam
  • 44bed narrowPeak
  • 43bigWig
  • 36bed bed3+
  • 36bed broadPeak
  • 36bigBed broadPeak
  • 36bigBed narrowPeak
  • 7tsv
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 56Homo sapiens
Biosample type
  • 56tissue
Organ
  • 728pancreas
  • 531connective tissue
  • 418adipose tissue
  • 395epithelium
  • 302kidney
  • 259heart
  • 239liver
  • 159bone element
  • 134vasculature
  • 131blood vessel
  • 107artery
  • 68brain
  • 58musculature of body
  • 56eye
  • 56limb
  • 20lung
  • 18ureter
  • 16skeleton
  • 15embryo
  • 9blood
  • 9bodily fluid
  • 8nerve
  • 5spleen
  • 5vein
  • 2intestine
  • 2pericardium
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1mammary gland
  • 1ovary
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 56AMP
Genome assembly (visualization)
  • 49GRCh38
  • 48hg19
Lab
  • 56AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
assay_title!
  • ChIP-seq
BIOSAMPLE
ASSAY

56 results

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Clear Filters
DNase-seq
ATAC-seq
total RNA-seq
Hi-C
WGBS
tissue
muscle of arm17
muscle of leg131
tibial nerve215
gastrocnemius medialis14
tibial artery211
distal epiphysis of femur1
distal epiphysis of humerus1
distal epiphysis of tibia1
forelimb muscle1
hindlimb muscle1
proximal epiphysis of femur1
proximal epiphysis of humerus1
proximal epiphysis of tibia1
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