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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • ChIP-seq
  • 33DNase-seq
  • 6Hi-C
  • 6total RNA-seq
  • 5RRBS
  • 2small RNA-seq
  • 1ATAC-seq
  • 1WGBS
  • 1pCHi-C
  • 1single cell RNA-seq
  • 1snATAC-seq
Assay category
  • 35DNA accessibility
  • 9Transcription
  • 63D chromatin structure
  • 6DNA methylation
Date released
  • 33June, 2019
  • 10July, 2019
  • 5March, 2020
  • 4August, 2017
  • 2February, 2020
  • 2May, 2022
  • 1January, 2018
Available data
  • 41bigWig
  • 40bam
  • 34bed bed3+
  • 33bed broadPeak
  • 33bed narrowPeak
  • 33bigBed broadPeak
  • 33bigBed narrowPeak
  • 9tsv
  • 4bed bedMethyl
  • 4bigBed bedMethyl
  • 2bedpe bed3+
  • 2fastq
  • 2hic
  • 1txt
Organism
  • 57Homo sapiens
Biosample type
  • 53tissue
  • 4primary cell
Organ
  • 728pancreas
  • 531connective tissue
  • 418adipose tissue
  • 395epithelium
  • 302kidney
  • 259heart
  • 239liver
  • 159bone element
  • 134vasculature
  • 131blood vessel
  • 107artery
  • 68brain
  • 57musculature of body
  • 56eye
  • 56limb
  • 20lung
  • 18ureter
  • 16skeleton
  • 15embryo
  • 9blood
  • 9bodily fluid
  • 8nerve
  • 5spleen
  • 5vein
  • 2intestine
  • 2pericardium
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1mammary gland
  • 1ovary
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 57AMP
Genome assembly (visualization)
  • 46hg19
  • 40GRCh38
Lab
  • 57AMP-T2D consortium
Audit category:
  • 1audit script error
  • 1inconsistent ontology term
assay_title!
  • ChIP-seq
BIOSAMPLE
ASSAY

57 results

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Clear Filters
DNase-seq
Hi-C
total RNA-seq
RRBS
small RNA-seq
ATAC-seq
WGBS
pCHi-C
single cell RNA-seq
snATAC-seq
tissue
muscle of arm17
muscle of leg131
skeletal muscle tissue141111
gastrocnemius medialis41
psoas muscle221
primary cell
skeletal muscle cell11
skeletal muscle satellite cell11
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