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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
Assay category
10
DNA binding
Target of assay
199
histone modification
198
histone
111
transcription factor
109
broad histone mark
88
narrow histone mark
56
control
29
RNA binding protein
16
recombinant protein
10
chromatin remodeller
3
other context
3
other post-translational modification
Date released
15
November, 2017
7
November, 2018
6
January, 2019
3
August, 2017
3
December, 2017
2
December, 2018
Available data
10
bam
10
bed narrowPeak
10
bigWig
10
fastq
8
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
10
Homo sapiens
Biosample type
7
cell line
2
in vitro differentiated cells
1
primary cell
Organ
5
liver
2
blood
2
bodily fluid
2
connective tissue
Project
10
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
10
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
7
inconsistent control read length
4
inconsistent control run_type
assay_title!
DNAme array
assay_title!!
DNAme array
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
cell line
HepG2
5
GM12878
2
in vitro differentiated cells
adipocyte
2
primary cell
skeletal muscle myoblast
1
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