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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
ChIP-seq
Assay category
84
DNA binding
Target of assay
74
histone
74
histone modification
44
broad histone mark
30
narrow histone mark
10
control
Date released
66
August, 2017
11
November, 2017
7
October, 2017
Available data
bam
3084
bigWig
1810
bed narrowPeak
1533
tsv
1358
fastq
1040
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
269
bed bed3+
153
zippedFastqFolder
77
txt
64
xls
23
bedpe bed3+
23
hic
13
bed bedMethyl
13
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
84
Homo sapiens
Biosample type
70
tissue
14
in vitro differentiated cells
Organ
22
connective tissue
20
liver
18
brain
15
musculature of body
9
pancreas
8
adipose tissue
Project
84
AMP
Genome assembly (visualization)
21
hg19
Lab
84
AMP-T2D consortium
Audit category:
1
missing controlled_by
assay_title!
DNAme array
RNA microarray
files.file_type!
bam
month_released!
July, 2019
BIOSAMPLE
ASSAY
84 results
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ChIP-seq
tissue
liver
20
skeletal muscle tissue
15
islet of Langerhans
9
subcutaneous abdominal adipose tissue
8
brain
7
+ See 4 more…
in vitro differentiated cells
adipocyte
14
See all biosamples
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