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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
Assay category
75
DNA binding
Target of assay
42
transcription factor
28
histone
28
histone modification
15
broad histone mark
13
narrow histone mark
5
control
4
RNA binding protein
3
chromatin remodeller
Date released
530
February, 2021
281
November, 2017
276
August, 2017
252
May, 2020
243
May, 2021
197
October, 2019
165
June, 2019
158
July, 2018
95
May, 2019
89
July, 2019
75
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
49
April, 2018
47
October, 2018
42
February, 2023
39
May, 2022
39
November, 2019
31
February, 2018
30
December, 2018
26
January, 2019
21
March, 2020
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
March, 2019
3
October, 2022
2
June, 2018
1
May, 2023
Available data
75
bam
75
fastq
70
bed narrowPeak
70
bigWig
50
bigBed narrowPeak
15
bed bed3+
Organism
75
Homo sapiens
Biosample type
36
in vitro differentiated cells
36
tissue
3
stem cell
Organ
50
liver
14
epithelium
7
embryo
Project
75
AMP
Genome assembly (visualization)
75
GRCh38
75
hg19
Lab
75
AMP-T2D consortium
Audit category:
27
inconsistent control
inconsistent ontology term
Audit category:
10
inconsistent control read length
assay_title!
DNAme array
audit.ERROR.category!
inconsistent ontology term
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
BIOSAMPLE
ASSAY
75 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
7
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
tissue
liver
29
right lobe of liver
7
stem cell
hESC
3
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