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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
4
total RNA-seq
1
pCHi-C
Assay category
12
DNA accessibility
4
Transcription
Date released
8
February, 2021
8
February, 2023
1
May, 2021
Available data
66
bam
58
bigWig
tsv
8
bed narrowPeak
4
bed bed3
4
txt
Organism
17
Homo sapiens
Biosample type
16
tissue
1
primary cell
Organ
616
liver
487
pancreas
313
epithelium
312
kidney
258
brain
219
heart
188
connective tissue
167
vasculature
162
blood vessel
114
limb
89
adipose tissue
83
artery
78
musculature of body
69
blood
69
bodily fluid
56
eye
38
nerve
24
spleen
22
vein
19
embryo
19
lung
18
ureter
17
bone element
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
16
AMP
1
T1D
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
16
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
inconsistent ontology term
assay_title!
DNAme array
audit.ERROR.category!
inconsistent ontology term
files.file_type!
tsv
BIOSAMPLE
ASSAY
17 results
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ATAC-seq
total RNA-seq
pCHi-C
tissue
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
distal epiphysis
1
+ See 7 more…
primary cell
megakaryocyte
1
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