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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
16
WGBS
Assay category
35
DNA methylation
Date released
23
July, 2019
6
August, 2017
6
November, 2018
Available data
2769
bam
2622
bigWig
1375
tsv
1321
bed narrowPeak
931
fastq
687
bigBed narrowPeak
354
tagAlign
265
bed bed3+
263
bed broadPeak
226
bigBed broadPeak
153
zippedFastqFolder
103
txt
35
bed bedMethyl
35
bigBed bedMethyl
20
bedpe bed3+
20
hic
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
35
Homo sapiens
Biosample type
25
tissue
10
primary cell
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
liver
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
35
AMP
Genome assembly (visualization)
19
hg19
16
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
DNAme array
biosample_type!
cell line
files.file_type!
ibed
month_released!
August, 2021
BIOSAMPLE
ASSAY
35 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
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