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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
1
RRBS
1
small RNA-seq
1
total RNA-seq
Assay category
10
DNA binding
2
Transcription
1
DNA methylation
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
2
control
Date released
10
June, 2019
3
July, 2019
Available data
13
bam
11
bigWig
9
bed narrowPeak
9
bigBed narrowPeak
2
tsv
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
bigBed broadPeak
Organism
13
Homo sapiens
Biosample type
tissue
13
primary cell
Organ
485
epithelium
440
pancreas
130
connective tissue
113
liver
89
vasculature
88
blood vessel
77
heart
69
blood
69
bodily fluid
68
artery
45
kidney
37
embryo
18
vein
13
musculature of body
7
brain
4
eye
3
adipose tissue
1
bone element
1
bone marrow
1
mammary gland
1
pericardium
Project
13
AMP
Genome assembly (visualization)
11
hg19
10
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
DNAme array
biosample_type!
tissue
files.file_type!
bigBed broadPeak
month_released!
November, 2017
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
RRBS
small RNA-seq
total RNA-seq
primary cell
skeletal muscle satellite cell
8
1
1
skeletal muscle cell
2
1
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