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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
269
ChIP-seq
4
FAIRE-seq
3
ATAC-seq
1
DNase-seq
Assay category
269
DNA binding
8
DNA accessibility
Target of assay
312
histone
312
histone modification
204
broad histone mark
narrow histone mark
65
transcription factor
20
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
60
May, 2019
42
April, 2019
38
November, 2017
34
December, 2017
34
October, 2018
31
October, 2019
16
August, 2017
8
November, 2018
5
October, 2017
4
January, 2019
3
December, 2018
2
July, 2019
Available data
1664
bam
1504
bigWig
1076
tsv
718
bed narrowPeak
453
bigBed narrowPeak
349
fastq
bed bed3+
198
bed broadPeak
176
bigBed broadPeak
157
txt
128
tagAlign
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
Organism
273
Homo sapiens
Biosample type
344
cell line
277
tissue
56
primary cell
12
in vitro differentiated cells
Organ
59
brain
43
liver
41
heart
40
pancreas
39
blood vessel
39
vasculature
34
limb
16
nerve
15
artery
11
kidney
10
spleen
7
adipose tissue
7
connective tissue
4
musculature of body
Project
277
AMP
Genome assembly (visualization)
272
GRCh38
241
hg19
Lab
277
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
2
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
assay_title!
DNAme array
files.file_type!
bed bed3+
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
277 results
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ChIP-seq
FAIRE-seq
ATAC-seq
DNase-seq
tissue
liver
37
body of pancreas
20
heart left ventricle
20
tibial nerve
16
tibial artery
14
+ See 28 more…
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