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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
Hi-C
2
ATAC-seq
2
pCHi-C
2
total RNA-seq
Assay category
10
3D chromatin structure
2
DNA accessibility
2
Transcription
Target of assay
histone
3
histone modification
3
narrow histone mark
Date released
318
November, 2017
200
May, 2022
189
June, 2019
175
February, 2023
171
August, 2021
150
February, 2021
125
May, 2020
99
October, 2019
87
November, 2018
84
May, 2021
68
August, 2017
63
December, 2017
59
September, 2020
47
September, 2023
41
July, 2019
35
December, 2018
30
November, 2019
28
May, 2019
21
October, 2018
20
April, 2019
19
April, 2020
18
January, 2019
16
January, 2021
16
March, 2020
15
September, 2018
14
May, 2023
11
September, 2017
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
5
May, 2024
4
July, 2018
4
October, 2022
1
August, 2022
1
December, 2019
Available data
tsv
17
bigWig
13
bam
12
bedpe bed3+
10
hic
2
ibed
Organism
16
Homo sapiens
Biosample type
10
tissue
4
in vitro differentiated cells
1
cell line
1
primary cell
Organ
5
pancreas
2
blood vessel
2
epithelium
2
heart
2
musculature of body
2
vasculature
1
liver
1
vein
Project
14
AMP
2
T1D
Genome assembly (visualization)
14
hg19
Lab
16
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
assay_title!
DNAme array
files.file_type!
tsv
organ_slims!
connective tissue
target.investigated_as!
histone
BIOSAMPLE
ASSAY
16 results
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Clear Filters
Hi-C
ATAC-seq
pCHi-C
total RNA-seq
tissue
islet of Langerhans
1
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
cell line
EndoC_BH1
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
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